GWAS-related eQTLs across different cancer types
We identified 337,131 eQTLs that overlap with GWAS linkage disequilibrium (LD) regions (r² ≥ 0.5).
|
Cancer type
|
eQTL type
|
tagSNP
|
Gene position (hg19)
|
p-value
|
|||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| THYM | cis | rs1875620 | 1 | rs9410276 | chr9:91559409 | C9orf47 | chr9:91605778-91611055:+ | -0.27 | -4.71 | 8.28E-6 | Response to statins (LDL cholesterol change) |
| THYM | cis | rs1875620 | 1 | rs9410277 | chr9:91559769 | C9orf47 | chr9:91605778-91611055:+ | -0.27 | -4.71 | 8.28E-6 | Response to statins (LDL cholesterol change) |
| THYM | cis | rs1875620 | 1 | rs9410278 | chr9:91560382 | C9orf47 | chr9:91605778-91611055:+ | -0.27 | -4.71 | 8.28E-6 | Response to statins (LDL cholesterol change) |
| THYM | cis | rs1875620 | 1 | rs9410283 | chr9:91565027 | C9orf47 | chr9:91605778-91611055:+ | -0.26 | -4.42 | 2.59E-5 | Response to statins (LDL cholesterol change) |
| THYM | cis | rs1875620 | 1 | rs9410285 | chr9:91567537 | C9orf47 | chr9:91605778-91611055:+ | -0.26 | -4.41 | 2.71E-5 | Response to statins (LDL cholesterol change) |
| THYM | cis | rs1875620 | 1 | rs9410414 | chr9:91549857 | C9orf47 | chr9:91605778-91611055:+ | -0.26 | -4.7 | 8.7E-6 | Response to statins (LDL cholesterol change) |
| THYM | cis | rs1875620 | 1 | rs9410415 | chr9:91552207 | C9orf47 | chr9:91605778-91611055:+ | -0.26 | -4.68 | 9.7E-6 | Response to statins (LDL cholesterol change) |
| THYM | cis | rs1875620 | 1 | rs9410424 | chr9:91561741 | C9orf47 | chr9:91605778-91611055:+ | -0.27 | -4.71 | 8.28E-6 | Response to statins (LDL cholesterol change) |
| THYM | cis | rs1875620 | 1 | rs9410426 | chr9:91562847 | C9orf47 | chr9:91605778-91611055:+ | -0.27 | -4.71 | 8.28E-6 | Response to statins (LDL cholesterol change) |
| THYM | cis | rs1875620 | 1 | rs9410427 | chr9:91562866 | C9orf47 | chr9:91605778-91611055:+ | -0.27 | -4.71 | 8.28E-6 | Response to statins (LDL cholesterol change) |
| THYM | cis | rs1875620 | 1 | rs9410428 | chr9:91562881 | C9orf47 | chr9:91605778-91611055:+ | 0.26 | 4.45 | 2.34E-5 | Response to statins (LDL cholesterol change) |
| THYM | cis | rs1875620 | 1 | rs9410431 | chr9:91564117 | C9orf47 | chr9:91605778-91611055:+ | -0.27 | -4.71 | 8.28E-6 | Response to statins (LDL cholesterol change) |
| THYM | cis | rs1875620 | 1 | rs9410432 | chr9:91564233 | C9orf47 | chr9:91605778-91611055:+ | -0.27 | -4.71 | 8.28E-6 | Response to statins (LDL cholesterol change) |
| THYM | cis | rs1875620 | 1 | rs9410435 | chr9:91566201 | C9orf47 | chr9:91605778-91611055:+ | -0.26 | -4.41 | 2.71E-5 | Response to statins (LDL cholesterol change) |
| THYM | cis | rs1875620 | 1 | rs9410436 | chr9:91566370 | C9orf47 | chr9:91605778-91611055:+ | 0.26 | 4.41 | 2.71E-5 | Response to statins (LDL cholesterol change) |